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Vladimı́r Beneš

European Molecular Biology Laboratory · DE
Area of research
Molecular Biology · Cancer Research
Research interest
Research interests include MicroRNA in disease regulation, RNA Research and Splicing, RNA and protein synthesis mechanisms, and Genomics and Phylogenetic Studies.
h-index
89
citations
54,026
works
579
NIH funding
primary concept
Biology
email

Recent publications

Human gut bacteria bioaccumulate per- and polyfluoroalkyl substances
Nature Microbiology 2025cited by 32position: middledoi
A genome resource for the marine annelid Platynereis spp
BMC Genomics 2025cited by 5position: middledoi
A Senescent Cluster in Aged Human Hematopoietic Stem Cell Compartment as Target for Senotherapy
International Journal of Molecular Sciences 2025cited by 4position: middledoi
Genetic lesions in nodular lymphocyte-predominant Hodgkin lymphoma and T cell/histiocyte-rich large B-cell lymphoma identified by whole genome sequencing
Leukemia 2025cited by 4position: middledoi
Integrative spatial and multi-omic profiling in bladder cancer links L1 retrotransposition to extrachromosomal DNA, genomic instability, and viral mimicry response
bioRxiv (Cold Spring Harbor Laboratory) 2025cited by 1position: middledoi
Author Reply to Peer Reviews of Epigenetic dysregulation of IRF9 drives excessive interferon signalling in COPD
2025cited by 0position: middledoi
Non-apoptotic FAS signaling controls mTOR activation and extrafollicular maturation in human B cells
Science Immunology 2024cited by 21position: middledoi
Developmental signals control chromosome segregation fidelity during pluripotency and neurogenesis by modulating replicative stress
Nature Communications 2024cited by 15position: middledoi
Evolution of SARS-CoV-2 in the Rhine-Neckar/Heidelberg Region 01/2021 – 07/2023
Infection Genetics and Evolution 2024cited by 2position: lastdoi
Clonally resolved single-cell multi-omics identifies routes of cellular differentiation in acute myeloid leukemia
Cell stem cell 2023cited by 91position: middledoi
High‐resolution transcriptomic and epigenetic profiling identifies novel regulators of COPD
The EMBO Journal 2023cited by 26position: middledoi
RNA-sequencing based first choice of treatment and determination of risk in multiple myeloma
Frontiers in Immunology 2023cited by 11position: middledoi
Epigenetic deregulation of IFN and WNT pathways in AT2 cells impairs alveolar regeneration (in COPD)
bioRxiv (Cold Spring Harbor Laboratory) 2023cited by 3position: middledoi
A faecal microbiota signature with high specificity for pancreatic cancer
Gut 2022cited by 277position: middledoi
Drivers and determinants of strain dynamics following fecal microbiota transplantation
Nature Medicine 2022cited by 214position: middledoi
Rewired glycosylation activity promotes scarless regeneration and functional recovery in spiny mice after complete spinal cord transection
Developmental Cell 2022cited by 83position: middledoi
Neutralizing antibody response against the B.1.617.2 (delta) and the B.1.1.529 (omicron) variants after a third mRNA SARS-CoV-2 vaccine dose in kidney transplant recipients
American Journal of Transplantation 2022cited by 48position: middledoi
Interferon-Driven Immune Dysregulation in Common Variable Immunodeficiency–Associated Villous Atrophy and Norovirus Infection
Journal of Clinical Immunology 2022cited by 31position: middledoi
Impact of high platelet turnover on the platelet transcriptome: Results from platelet RNA-sequencing in patients with sepsis
PLoS ONE 2022cited by 14position: middledoi
Integrated genomic analysis reveals actionable targets in pediatric spinal cord low-grade gliomas
Acta Neuropathologica Communications 2022cited by 11position: middledoi
Clonally resolved single-cell multi-omics identifies routes of cellular differentiation in acute myeloid leukemia
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 8position: middledoi
Targeted parallel <scp>DNA</scp> sequencing detects circulating tumor‐associated variants of the mitochondrial and nuclear genomes in patients with neuroblastoma
Cancer Reports 2022cited by 2position: middledoi
3019 – SINGLE-CELL PROTEO-GENOMIC REFERENCE MAPS OF THE HEMATOPOIETIC SYSTEM ENABLE THE PURIFICATION AND MASSIVE PROFILING OF PRECISELY DEFINED CELL STATES
Experimental Hematology 2022cited by 2position: middledoi
High-resolution transcriptomic and epigenetic profiling identifies novel regulators of COPD phenotypes in human lung fibroblasts
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 1position: middledoi
High-resolution transcriptomic and epigenetic profiling across disease stages identifies novel regulators of COPD phenotypes.
2022cited by 0position: middledoi
Single-cell proteo-genomic reference maps of the hematopoietic system enable the purification and massive profiling of precisely defined cell states
Nature Immunology 2021cited by 201position: middledoi
The expansion of human T-bet <sup>high</sup> CD21 <sup>low</sup> B cells is T cell dependent
Science Immunology 2021cited by 144position: middledoi
Single‐cell transcriptomics reveals immune response of intestinal cell types to viral infection
Molecular Systems Biology 2021cited by 57position: middledoi
AXL Inhibition in Macrophages Stimulates Host-versus-Leukemia Immunity and Eradicates Naïve and Treatment-Resistant Leukemia
Cancer Discovery 2021cited by 49position: middledoi
Surgical treatment of brainstem cavernous malformations: an international Delphi consensus
Journal of neurosurgery 2021cited by 29position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Tobias Rausch · Genomics (United Kingdom)12 papers (2015–2025)Andreas Trumpp · TRUMPF (Germany)7 papers (2016–2022)Jan O. Korbel · Eppendorf (Belgium)6 papers (2015–2025)Malte Paulsen · European Molecular Biology Laboratory6 papers (2020–2022)Martina U. Muckenthaler · University Medical Centre Mannheim5 papers (2012–2020)Simon Raffel · Heidelberg University5 papers (2018–2025)Diana Ordoñez‐Rueda · German Cancer Research Center5 papers (2020–2022)Sergio Triana · Broad Institute5 papers (2020–2022)Daniel Hübschmann · Heinrich Heine University Düsseldorf5 papers (2021–2024)Theodore Alexandrov · BioInnovation Institute5 papers (2020–2022)Renate Kirschner‐Schwabe · Krankenhaus St. Joseph-Stift Bremen4 papers (2015–2020)Anthony D. Ho · Mayo Clinic in Arizona4 papers (2016–2025)Dominik Vonficht · German Cancer Research Center4 papers (2016–2022)Thomas Muley · Heidelberg University4 papers (2013–2023)Cornelia Eckert · Deutschen Konsortium für Translationale Krebsforschung4 papers (2015–2020)Arne Warth · Heidelberg University4 papers (2013–2023)Paul Collier · Cornell University4 papers (2016–2018)Andreas E. Kulozik · German Cancer Research Center4 papers (2015–2020)Joachim B. Kunz · Heidelberg University4 papers (2015–2020)Obul Reddy Bandapalli · German Cancer Research Center3 papers (2015–2017)