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François‐Xavier Weill

Institut Pasteur · FR
Area of research
Food Science · Endocrinology
Research interest
Research interests include Salmonella and Campylobacter epidemiology, Vibrio bacteria research studies, Antibiotic Resistance in Bacteria, and Escherichia coli research studies.
h-index
71
citations
17,462
works
523
NIH funding
primary concept
email

Recent publications

The evolution and international spread of extensively drug resistant Shigella sonnei
Nature Communications 2023cited by 70position: middledoi
Genome degradation promotes <i>Salmonella</i> pathoadaptation by remodeling fimbriae-mediated proinflammatory response
National Science Review 2023cited by 59position: middledoi
Genomic epidemiology reveals multidrug resistant plasmid spread between Vibrio cholerae lineages in Yemen
Nature Microbiology 2023cited by 53position: middledoi
A global genomic analysis of Salmonella Concord reveals lineages with high antimicrobial resistance in Ethiopia
Nature Communications 2023cited by 23position: middledoi
Genomic Microevolution of <i>Vibrio cholerae</i> O1, Lake Tanganyika Basin, Africa
Emerging infectious diseases 2023cited by 19position: middledoi
O-Antigen Diversification Masks Identification of Highly Pathogenic Shiga Toxin-Producing Escherichia coli O104:H4-Like Strains
Microbiology Spectrum 2023cited by 9position: middledoi
The genus Serratia revisited by genomics
Nature Communications 2022cited by 106position: middledoi
Population structure analysis and laboratory monitoring of Shigella by core-genome multilocus sequence typing
Nature Communications 2022cited by 36position: lastdoi
Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei
Nature Communications 2021cited by 106position: middledoi
Shiga Toxin–Associated Hemolytic Uremic Syndrome in Adults, France, 2009–2017
Emerging infectious diseases 2021cited by 20position: middledoi
Global phylogenomics of multidrug-resistant Salmonella enterica serotype Kentucky ST198
Microbial Genomics 2019cited by 128position: lastdoi
Outbreak of Shiga toxin-producing Escherichia coli (STEC) O26 paediatric haemolytic uraemic syndrome (HUS) cases associated with the consumption of soft raw cow’s milk cheeses, France, March to May 2019
Eurosurveillance 2019cited by 77position: middledoi
Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei
Nature Communications 2019cited by 74position: middledoi
Paediatric haemolytic uraemic syndrome related to Shiga toxin-producing Escherichia coli, an overview of 10 years of surveillance in France, 2007 to 2016
Eurosurveillance 2019cited by 74position: middledoi
Publisher Correction: Genomic insights into the 2016–2017 cholera epidemic in Yemen
Nature 2019cited by 4position: firstdoi
Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens
Science 2018cited by 408position: middledoi
Horizontal antimicrobial resistance transfer drives epidemics of multiple Shigella species
Nature Communications 2018cited by 201position: middledoi
Genomic insights into the 2016–2017 cholera epidemic in Yemen
Nature 2018cited by 191position: firstdoi
Pan-genome Analysis of Ancient and Modern Salmonella enterica Demonstrates Genomic Stability of the Invasive Para C Lineage for Millennia
Current Biology 2018cited by 93position: middledoi
Genomic epidemiology of Shigella in the United Kingdom shows transmission of pathogen sublineages and determinants of antimicrobial resistance
Scientific Reports 2018cited by 92position: middledoi
Genomic history of the seventh pandemic of cholera in Africa
Science 2017cited by 384position: firstdoi
Integrated view of <i>Vibrio cholerae</i> in the Americas
Science 2017cited by 177position: middledoi
The clinical and microbiological characteristics of enteric fever in Cambodia, 2008-2015
PLoS neglected tropical diseases 2017cited by 48position: middledoi
Genome-scale rates of evolutionary change in bacteria
Microbial Genomics 2016cited by 270position: middledoi
Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings
Nature Genetics 2016cited by 219position: middledoi
An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid
Nature Communications 2016cited by 190position: middledoi
Molecular Surveillance Identifies Multiple Transmissions of Typhoid in West Africa
PLoS neglected tropical diseases 2016cited by 111position: middledoi
Global phylogeography and evolutionary history of Shigella dysenteriae type 1
Nature Microbiology 2016cited by 78position: lastdoi
A Phylogenetic and Phenotypic Analysis of Salmonella enterica Serovar Weltevreden, an Emerging Agent of Diarrheal Disease in Tropical Regions
PLoS neglected tropical diseases 2016cited by 71position: middledoi
What’s in a Name? Species-Wide Whole-Genome Sequencing Resolves Invasive and Noninvasive Lineages of Salmonella enterica Serotype Paratyphi B
mBio 2016cited by 40position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Nicholas R. Thomson · University of London11 papers (2015–2023)Simon Le Hello · Institut Pasteur7 papers (2013–2019)Claire Jenkins · University of Cambridge7 papers (2015–2023)Sophie Lefèvre · Institut Pasteur6 papers (2018–2023)Kate S. Baker · University of Cambridge5 papers (2015–2023)Kathryn E. Holt · London School of Hygiene & Tropical Medicine5 papers (2016–2021)Stephen Baker · UPMC Hillman Cancer Center5 papers (2015–2021)Elisabeth Njamkepo · Institut Pasteur5 papers (2017–2023)Timothy J. Dallman · Utrecht University4 papers (2016–2021)Malika Gouali · Institut Pasteur4 papers (2013–2019)Pieter‐Jan Ceyssens · KU Leuven3 papers (2019–2023)Julian Parkhill · University of Cambridge3 papers (2015–2017)Henriette de Valk · Institut Pasteur3 papers (2014–2019) · 3 papers (2013–2019)Zhemin Zhou · Soochow University3 papers (2012–2018)Laëtitia Fabre · Institut Pasteur3 papers (2013–2022)Gordon Dougan · University of Cambridge3 papers (2012–2017)Jane Hawkey · London School of Hygiene & Tropical Medicine3 papers (2016–2021)Satheesh Nair · UK Health Security Agency3 papers (2012–2018)Marie‐Laure Quilici · Institut Pasteur3 papers (2017–2023)