Area of research
Molecular Medicine · Molecular Biology
Research interest
Research interests include Biology, Genome, Klebsiella pneumoniae, Plasmid, Computational biology, and Microbiology.
Targeted sequencing of <i>Enterobacterales</i> bacteria using CRISPR-Cas9 enrichment and Oxford Nanopore Technologies
Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi
Shigella sonnei: epidemiology, evolution, pathogenesis, resistance and host interactions
A validated pangenome-scale metabolic model for the Klebsiella pneumoniae species complex
Within–patient and global evolutionary dynamics of Klebsiella pneumoniae ST17
Bactabolize is a tool for high-throughput generation of bacterial strain-specific metabolic models
Bactabolize is a tool for high-throughput generation of bacterial strain-specific metabolic models
High-level nitrofurantoin resistance in a clinical isolate of <i>Klebsiella pneumoniae:</i> a comparative genomics and metabolomics analysis
Bactabolize: A tool for high-throughput generation of bacterial strain-specific metabolic models
Bactabolize: A tool for high-throughput generation of bacterial strain-specific metabolic models
Species interactions constrain adaptation and preserve ecological stability in an experimental microbial community
ESBL plasmids in Klebsiella pneumoniae: diversity, transmission and contribution to infection burden in the hospital setting
Epidemiology and genomic analysis of Klebsiella oxytoca from a single hospital network in Australia
Linear plasmids in Klebsiella and other Enterobacteriaceae
Transmission of <i>Klebsiella</i> strains and plasmids within and between grey‐headed flying fox colonies
Trycycler: consensus long-read assemblies for bacterial genomes
Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei
Silent spread of mobile colistin resistance gene mcr-9.1 on IncHI2 ‘superplasmids’ in clinical carbapenem-resistant Enterobacterales
Genomic surveillance of antimicrobial resistant bacterial colonisation and infection in intensive care patients
wMel Wolbachia genome remains stable after 7 years in Australian Aedes aegypti field populations
Impact of insertion sequences on convergent evolution of Shigella species
Global phylogenomics of multidrug-resistant Salmonella enterica serotype Kentucky ST198
Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii
Evolution of a clade of Acinetobacter baumannii global clone 1, lineage 1 via acquisition of carbapenem- and aminoglycoside-resistance genes and dispersion of ISAba1
Z/I1 Hybrid Virulence Plasmids Carrying Antimicrobial Resistance genes in S. Typhimurium from Australian Food Animal Production
Emergence and rapid global dissemination of CTX-M-15-associated <i>Klebsiella pneumoniae</i> strain ST307
Genome-scale rates of evolutionary change in bacteria
An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid
Repeated local emergence of carbapenem-resistant Acinetobacter baumannii in a single hospital ward
Global phylogeography and evolutionary history of Shigella dysenteriae type 1