Area of research
Artificial Intelligence · Microbiology
Research interest
Research interests include Bayesian Modeling and Causal Inference, Reproductive tract infections research, Tuberculosis Research and Epidemiology, and Antibiotic Resistance in Bacteria.
Evolution and transmission of antibiotic resistance is driven by Beijing lineage <i>Mycobacterium tuberculosis</i> in Vietnam
SNPPar: identifying convergent evolution and other homoplasies from microbial whole-genome alignments
SNPPar: identifying convergent evolution and other homoplasies from microbial whole-genome alignments.
SNPPar: identifying convergent evolution and other homoplasies from microbial whole-genome alignments
The vaginal microbiome and preterm birth
Frequent transmission of the Mycobacterium tuberculosis Beijing lineage and positive selection for the EsxW Beijing variant in Vietnam
Changes in vaginal community state types reflect major shifts in the microbiome
Genome-scale rates of evolutionary change in bacteria
An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid
Repeated local emergence of carbapenem-resistant Acinetobacter baumannii in a single hospital ward
Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in <i>Klebsiella pneumoniae</i> , an urgent threat to public health
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events
ISMapper: identifying transposase insertion sites in bacterial genomes from short read sequence data
Extensive Capsule Locus Variation and Large-Scale Genomic Recombination within the Klebsiella pneumoniae Clonal Group 258