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Thomas Keane

European Bioinformatics Institute · GB
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Area of research
Molecular Biology · Genetics
Research interest
Research interests include Biology, Genetics, Genome, Computational biology, Imputation (statistics), and Computer science.
h-index
citations
20,218
works
19
NIH funding
primary concept
email

Recent publications

The Federated European Genome–Phenome Archive as a global network for sharing human genomics data
Nature Genetics 2025cited by 10position: lastdoi
Complete genome assemblies of two mouse subspecies reveal structural diversity of telomeres and centromeres
Nature Genetics 2025cited by 7position: lastdoi
IFI207, a young and fast‐evolving protein, controls retroviral replication via the STING pathway
mBio 2024cited by 6position: middledoi
The Type 2 Diabetes Knowledge Portal: An open access genetic resource dedicated to type 2 diabetes and related traits
Cell Metabolism 2023cited by 131position: middledoi
Twelve years of SAMtools and BCFtools
GigaScience 2021cited by 15,406position: middledoi
HTSlib: C library for reading/writing high-throughput sequencing data
GigaScience 2021cited by 456position: middledoi
GA4GH: International policies and standards for data sharing across genomic research and healthcare
Cell Genomics 2021cited by 290position: middledoi
Transcriptional activity and strain-specific history of mouse pseudogenes
Nature Communications 2020cited by 37position: middledoi
Leveraging European infrastructures to access 1 million human genomes by 2022
Nature Reviews Genetics 2019cited by 97position: middledoi
Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci
Nature Genetics 2018cited by 328position: lastdoi
Repeat associated mechanisms of genome evolution and function revealed by the <i>Mus caroli</i> and <i>Mus pahari</i> genomes
Genome Research 2018cited by 135position: middledoi
The UK10K project identifies rare variants in health and disease
Nature 2015cited by 1,186position: middledoi
Improved imputation of low-frequency and rare variants using the UK10K haplotype reference panel
Nature Communications 2015cited by 384position: middledoi
The BRAF Pseudogene Functions as a Competitive Endogenous RNA and Induces Lymphoma In Vivo
Cell 2015cited by 368position: middledoi
The genomic and phenotypic diversity of Schizosaccharomyces pombe
Nature Genetics 2015cited by 204position: middledoi
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel
Nature Communications 2014cited by 455position: middledoi
The mutational landscapes of genetic and chemical models of Kras-driven lung cancer
Nature 2014cited by 341position: middledoi
Nonsense Mutations in the Shelterin Complex Genes ACD and TERF2IP in Familial Melanoma
JNCI Journal of the National Cancer Institute 2014cited by 179position: middledoi
The genomic landscape shaped by selection on transposable elements across 18 mouse strains
Genome biology 2012cited by 198position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

David J. Adams · Wellcome Sanger Institute5 papers (2012–2025)John Marshall · University of Glasgow2 papers (2021–2021)Heng Li · Xijing Hospital2 papers (2021–2021)Jingtao Lilue · European Bioinformatics Institute2 papers (2024–2025) · 2 papers (2021–2021) · 2 papers (2021–2021)Petr Danecek · Wellcome Sanger Institute2 papers (2021–2021) · 2 papers (2021–2021) · 2 papers (2021–2021)Katarzyna Marta Zoltowska · KU Leuven1 papers (2025–2025)Jennifer Liddle · Newcastle University1 papers (2021–2021) · 1 papers (2014–2014)Francis Alonzo · New York University1 papers (2024–2024)Scott J. Rodig · Massachusetts Institute of Technology1 papers (2015–2015) · 1 papers (2025–2025)Olivier Elemento · Cornell University1 papers (2015–2015)Kim Wong · Newcastle upon Tyne Hospitals NHS Foundation Trust1 papers (2012–2012) · 1 papers (2015–2015)David Wu · University of Washington1 papers (2015–2015)Bjoern Chapuy · Humboldt-Universität zu Berlin1 papers (2015–2015)
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