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Desi Shang

Harbin Medical University · CN
Area of research
Molecular Biology · Cancer Research
Research interest
Research interests include Computational biology, Biology, microRNA, Computer science, Gene, and Transcription factor.
h-index
citations
1,237
works
59
NIH funding
primary concept
email

Recent publications

SpaGraphCCI: Spatial cell–cell communication inference through GAT‐based co‐convolutional feature integration
IET Systems Biology 2025cited by 2position: lastdoi
TFTG: A comprehensive database for human transcription factors and their targets
Computational and Structural Biotechnology Journal 2024cited by 10position: middledoi
scBlood: A comprehensive single-cell accessible chromatin database of blood cells
Computational and Structural Biotechnology Journal 2024cited by 4position: middledoi
<scp>PBAC</scp>: A pathway‐based attention convolution neural network for predicting clinical drug treatment responses
Journal of Cellular and Molecular Medicine 2024cited by 2position: lastdoi
Characterization of the metabolic alteration-modulated tumor microenvironment mediated by TP53 mutation and hypoxia
Computers in Biology and Medicine 2023cited by 26position: lastdoi
LncSEA 2.0: an updated platform for long non-coding RNA related sets and enrichment analysis
Nucleic Acids Research 2023cited by 26position: middledoi
Landscape and significance of human super enhancer-driven core transcription regulatory circuitry
Molecular Therapy — Nucleic Acids 2023cited by 21position: middledoi
Cis-Cardio: A comprehensive analysis platform for cardiovascular-relavant cis-regulation in human and mouse
Molecular Therapy — Nucleic Acids 2023cited by 4position: middledoi
The whole transcriptome analysis and the circRNA-lncRNA network construction in arsenic trioxide-treated mice myocardium
Biomedicine & Pharmacotherapy 2022cited by 14position: middledoi
A Pyroptosis-Related Signature Predicts Overall Survival and Immunotherapy Responses in Lung Adenocarcinoma
Frontiers in Genetics 2022cited by 11position: middledoi
GREAP: a comprehensive enrichment analysis software for human genomic regions
Briefings in Bioinformatics 2022cited by 7position: middledoi
Identification of microsatellite instability and immune-related prognostic biomarkers in colon adenocarcinoma
Frontiers in Immunology 2022cited by 6position: middledoi
Identifying individualized risk subpathways reveals pan-cancer molecular classification based on multi-omics data
Computational and Structural Biotechnology Journal 2022cited by 6position: middledoi
TcoFBase: a comprehensive database for decoding the regulatory transcription co-factors in human and mouse
Nucleic Acids Research 2021cited by 25position: middledoi
OUP accepted manuscript
Nucleic Acids Research 2021cited by 22position: middledoi
Comprehensive characterization of a drug-resistance-related ceRNA network across 15 anti-cancer drug categories
Molecular Therapy — Nucleic Acids 2021cited by 17position: lastdoi
TF-Marker: A comprehensive manually curated database for transcription factors and related markers in specific cell and tissue types in human.
Zenodo (CERN European Organization for Nuclear Research) 2021cited by 14position: middledoi
TF-Marker: A comprehensive manually curated database for transcription factors and related markers in specific cell and tissue types in human.
Zenodo (CERN European Organization for Nuclear Research) 2021cited by 10position: middledoi
Differential RNA expression profiles and competing endogenous RNA-associated regulatory networks during the progression of atherosclerosis
Epigenomics 2021cited by 9position: middledoi
Heterogeneity analysis of the immune microenvironment in laryngeal carcinoma revealed potential prognostic biomarkers
Human Molecular Genetics 2021cited by 9position: middledoi
Cancer CRC: A Comprehensive Cancer Core Transcriptional Regulatory Circuit Resource and Analysis Platform
Frontiers in Oncology 2021cited by 8position: middledoi
Identification and Validation of an Immune and Ferroptosis-Combined Index for Non–Small Cell Lung Cancer
Frontiers in Genetics 2021cited by 3position: middledoi
FADS1 promotes the progression of laryngeal squamous cell carcinoma through activating AKT/mTOR signaling
Cell Death and Disease 2020cited by 71position: middledoi
Comprehensive circRNA expression profile and construction of circRNA-related ceRNA network in cardiac fibrosis
Biomedicine & Pharmacotherapy 2020cited by 40position: middledoi
Construction and Analysis of Human Diseases and Metabolites Network
Frontiers in Bioengineering and Biotechnology 2020cited by 21position: lastdoi
Characterizing heterogeneity of non‐small cell lung tumour microenvironment to identify signature prognostic genes
Journal of Cellular and Molecular Medicine 2020cited by 16position: lastdoi
ncDRMarker: a computational method for identifying non-coding RNA signatures of drug resistance based on heterogeneous network
Annals of Translational Medicine 2020cited by 7position: middledoi
RNAactDrug: a comprehensive database of RNAs associated with drug sensitivity from multi-omics data
Briefings in Bioinformatics 2019cited by 67position: middledoi
Identifying subpathway signatures for individualized anticancer drug response by integrating multi-omics data
Journal of Translational Medicine 2019cited by 21position: middledoi
Identification and comprehensive characterization of lncRNAs with copy number variations and their driving transcriptional perturbed subpathways reveal functional significance for cancer
Briefings in Bioinformatics 2019cited by 19position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Chunquan Li · Kunming University of Science and Technology31 papers (2012–2024)Yanjun Xu · Harbin Medical University30 papers (2012–2022)Xia Li · Beijing Shijitan Hospital27 papers (2012–2022)Haixiu Yang · Harbin Medical University23 papers (2013–2020)Chunlong Zhang · Harbin Medical University22 papers (2012–2022)Junwei Han · Harbin Medical University18 papers (2012–2019)Feng Li · Guangzhou University of Chinese Medicine13 papers (2014–2022)Fei Su · Harbin Medical University12 papers (2013–2019)Yunpeng Zhang · Chengde Medical University11 papers (2013–2019)Qianlan Yao · Fudan University11 papers (2012–2015)Qiuyu Wang · Fudan University10 papers (2015–2024)Zeguo Sun · Harbin Medical University10 papers (2013–2017)Fengcui Qian · Harbin Medical University10 papers (2021–2024)Xinrui Shi · China Pharmaceutical University8 papers (2014–2017)Yunpeng Zhang · Ministry of Education of the People's Republic of China8 papers (2012–2022)Yingqi Xu · Harbin Medical University8 papers (2017–2022)Chenchen Feng · Fudan University7 papers (2015–2023)Jiaqi Liu · Zhujiang Hospital7 papers (2021–2023)Chao Song · Fudan University7 papers (2019–2024)Yuezhu Wang · Fudan University7 papers (2021–2024)