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Simone Sidoli

Albert Einstein College of Medicine · US
Area of research
Molecular Biology · Spectroscopy
Research interest
Research interests include Biology, Chromatin, Histone, Epigenetics, Cell biology, and Nucleus accumbens.
h-index
citations
1,886
works
33
NIH funding
primary concept
email

Recent publications

Bidirectional histone monoaminylation dynamics regulate neural rhythmicity
Nature 2025cited by 42position: middledoi
Extracellular Histones as Exosome Membrane Proteins Regulated by Cell Stress
Journal of Extracellular Vesicles 2025cited by 28position: middledoi
Chaperone-mediated autophagy regulates neuronal activity by sex-specific remodelling of the synaptic proteome
Nature Cell Biology 2025cited by 10position: middledoi
A needed nomenclature for nucleosomes
Molecular Cell 2025cited by 9position: middledoi
Sex-Specific Induction of H3K27me1 in the Prefrontal Cortex Mediates the Enduring Effects of Early Life Stress
bioRxiv (Cold Spring Harbor Laboratory) 2025cited by 1position: middledoi
Micronuclear collapse from oxidative damage
Science 2024cited by 66position: middledoi
Alzheimer’s disease-linked risk alleles elevate microglial cGAS-associated senescence and neurodegeneration in a tauopathy model
Neuron 2024cited by 51position: middledoi
An iron rheostat controls hematopoietic stem cell fate
Cell stem cell 2024cited by 39position: middledoi
Unique structural configuration of EV-DNA primes Kupffer cell-mediated antitumor immunity to prevent metastatic progression
Nature Cancer 2024cited by 25position: middledoi
Mono-methylation of lysine 27 at histone 3 confers lifelong susceptibility to stress
Neuron 2024cited by 24position: middledoi
Cell type–specific epigenetic priming of gene expression in nucleus accumbens by cocaine
Science Advances 2024cited by 20position: middledoi
Involution of brown adipose tissue through a Syntaxin 4 dependent pyroptosis pathway
Nature Communications 2024cited by 11position: middledoi
Decoding cocaine-induced proteomic adaptations in the mouse nucleus accumbens
Science Signaling 2024cited by 7position: middledoi
Epigenetic dysregulation from chromosomal transit in micronuclei
Nature 2023cited by 114position: middledoi
Dynamic de novo heterochromatin assembly and disassembly at replication forks ensures fork stability
Nature Cell Biology 2023cited by 61position: middledoi
mTORC2–NDRG1–CDC42 axis couples fasting to mitochondrial fission
Nature Cell Biology 2023cited by 45position: middledoi
Dynamic network-guided CRISPRi screen identifies CTCF-loop-constrained nonlinear enhancer gene regulatory activity during cell state transitions
Nature Genetics 2023cited by 43position: middledoi
Monomethylation of Lysine 27 at Histone 3 Confers Lifelong Susceptibility to Stress
bioRxiv (Cold Spring Harbor Laboratory) 2023cited by 11position: middledoi
The transcription factor PAX8 promotes angiogenesis in ovarian cancer through interaction with SOX17
Science Signaling 2022cited by 54position: middledoi
CRISPR screening uncovers a central requirement for HHEX in pancreatic lineage commitment and plasticity restriction
Nature Cell Biology 2022cited by 39position: middledoi
Endocrine resistance and breast cancer plasticity are controlled by CoREST
Nature Structural & Molecular Biology 2022cited by 28position: middledoi
Histone monoaminylation dynamics are regulated by a single enzyme and promote neural rhythmicity
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 18position: middledoi
Cell-Type-Specific Epigenetic Priming of Gene Expression in Nucleus Accumbens by Cocaine
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 8position: middledoi
QSER1 protects DNA methylation valleys from de novo methylation
Science 2021cited by 119position: middledoi
Long-term behavioral and cell-type-specific molecular effects of early life stress are mediated by H3K79me2 dynamics in medium spiny neurons
Nature Neuroscience 2021cited by 114position: middledoi
The Polycomb protein RING1B enables estrogen-mediated gene expression by promoting enhancer–promoter interaction and R-loop formation
Nucleic Acids Research 2021cited by 33position: middledoi
Author Correction: Long-term behavioral and cell-type-specific molecular effects of early life stress are mediated by H3K79me2 dynamics in medium spiny neurons
Nature Neuroscience 2021cited by 6position: middledoi
An integrated multi-omics approach identifies epigenetic alterations associated with Alzheimer’s disease
Nature Genetics 2020cited by 371position: middledoi
H1 histones control the epigenetic landscape by local chromatin compaction
Nature 2020cited by 191position: middledoi
Author Correction: An integrated multi-omics approach identifies epigenetic alterations associated with Alzheimer’s disease
Nature Genetics 2020cited by 11position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Eric J. Nestler · Allen Institute for Brain Science8 papers (2021–2025) · 7 papers (2021–2025)Yentl Y. van der Zee · Allen Institute for Brain Science6 papers (2021–2024)Aarthi Ramakrishnan · Allen Institute for Brain Science6 papers (2021–2024)Benjamin A. García · Princeton University6 papers (2019–2022)Li Shen · Allen Institute for Brain Science6 papers (2021–2024)Caleb J. Browne · Allen Institute for Brain Science6 papers (2021–2024)Hope Kronman · NYU Langone Health6 papers (2021–2024)Angélica Torres‐Berrío · Allen Institute for Brain Science5 papers (2021–2025)Philipp Mews · Boston University5 papers (2021–2024)Deena M. Walker · Oregon Health & Science University4 papers (2021–2024)Molly Estill · Allen Institute for Brain Science4 papers (2022–2024)Eric M. Parise · Allen Institute for Brain Science4 papers (2021–2024)Casey K. Lardner · Horace Mann School4 papers (2021–2024)Orna Issler · Neurosciences Institute4 papers (2021–2024) · 3 papers (2021–2023)Chuan He · Icahn School of Medicine at Mount Sinai3 papers (2020–2021)Bess P. Rosen · Cornell University3 papers (2021–2023)Dapeng Yang · Nanjing University of Chinese Medicine3 papers (2021–2023)Yemin Lan · Proteostasis Therapeutics (United States)3 papers (2019–2020)