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Paulo Wender Portal Gomes

University of California San Diego · US
Area of research
Molecular Biology · Plant Science
Research interest
Research interests include Metabolomics and Mass Spectrometry Studies, Gut microbiota and health, Phytochemistry Medicinal Plant Applications, and Phytochemistry and Bioactivity Studies.
h-index
17
citations
790
works
74
NIH funding
primary concept
email

Recent publications

A universal language for finding mass spectrometry data patterns
Nature Methods 2025cited by 43position: middledoi
Enabling pan-repository reanalysis for big data science of public metabolomics data
Nature Communications 2025cited by 27position: middledoi
The microbiome diversifies long- to short-chain fatty acid-derived N-acyl lipids
Cell 2025cited by 24position: middledoi
A guide to reverse metabolomics—a framework for big data discovery strategy
Nature Protocols 2025cited by 19position: middledoi
The International Space Station has a unique and extreme microbial and chemical environment driven by use patterns
Cell 2025cited by 17position: middledoi
microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data
Nature Microbiology 2024cited by 109position: middledoi
Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
Nature Protocols 2024cited by 58position: middledoi
Co-occurrence network analysis reveals the alterations of the skin microbiome and metabolome in adults with mild to moderate atopic dermatitis
mSystems 2024cited by 22position: firstdoi
Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics
Nature Communications 2023cited by 78position: middledoi
A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data
bioRxiv (Cold Spring Harbor Laboratory) 2023cited by 5position: middledoi
A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data
Research Square 2023cited by 4position: middledoi
NPOmix: A machine learning classifier to connect mass spectrometry fragmentation data to biosynthetic gene clusters
PNAS Nexus 2022cited by 25position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Pieter C. Dorrestein · University of Connecticut5 papers (2022–2025)Helena Mannochio-Russo · University of California San Diego4 papers (2024–2025)Haoqi Nina Zhao · University of Washington3 papers (2024–2025)Mingxun Wang · University of California, Riverside3 papers (2022–2025)Shipei Xing · UC San Diego Health System2 papers (2025–2025)Simone Zuffa · University of San Diego2 papers (2025–2025)Victoria Deleray · University of California San Diego2 papers (2025–2025)Allegra T. Aron · University of Denver2 papers (2022–2025)Yasin El Abiead · University of California San Diego2 papers (2025–2025)Andrés Mauricio Caraballo‐Rodríguez · University of California San Diego2 papers (2025–2025)Ricardo Silva · Universidade de Ribeirão Preto1 papers (2022–2022)Jianhong Ching · National University of Singapore1 papers (2025–2025)Claire O’Donovan · Georgetown University1 papers (2025–2025)Cameron Martino · Tyson Foods (United States)1 papers (2025–2025)Robin Schmid · University of Bremen1 papers (2025–2025)Justin J. J. van der Hooft · University of Johannesburg1 papers (2022–2022)Katherine Louie · Lawrence Berkeley National Laboratory1 papers (2025–2025)Özgür Yürekten · European Bioinformatics Institute1 papers (2025–2025)Nicole E. Avalon · University of California, Irvine1 papers (2025–2025)Raphael Reher · Philipps University of Marburg1 papers (2022–2022)