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Naomi Habib

Jerusalem Institute for Israel Studies · US
Area of research
Molecular Biology · Neurology
Research interest
Research interests include Single-cell and spatial transcriptomics, Neuroinflammation and Neurodegeneration Mechanisms, Bioinformatics and Genomic Networks, and CRISPR and Genetic Engineering.
h-index
32
citations
29,755
works
92
NIH funding
primary concept
Medicine
email

Recent publications

Human subcutaneous and visceral adipocyte atlases uncover classical and nonclassical adipocytes and depot-specific patterns
Nature Genetics 2025cited by 38position: middledoi
Cell subtype-specific effects of genetic variation in the Alzheimer’s disease brain
Nature Genetics 2024cited by 172position: middledoi
Cellular communities reveal trajectories of brain ageing and Alzheimer’s disease
Nature 2024cited by 155position: middledoi
A cross-disease resource of living human microglia identifies disease-enriched subsets and tool compounds recapitulating microglial states
Nature Neuroscience 2024cited by 46position: middledoi
Molecular connectomics reveals a glucagon-like peptide 1-sensitive neural circuit for satiety
Nature Metabolism 2024cited by 45position: middledoi
Opportunities and challenges of single-cell and spatially resolved genomics methods for neuroscience discovery
Nature Neuroscience 2024cited by 28position: middledoi
Implementation and validation of single-cell genomics experiments in neuroscience
Nature Neuroscience 2024cited by 18position: lastdoi
Applying single-cell and single-nucleus genomics to studies of cellular heterogeneity and cell fate transitions in the nervous system
Nature Neuroscience 2024cited by 15position: middledoi
Multicellular communities are perturbed in the aging human brain and Alzheimer’s disease
Nature Neuroscience 2023cited by 105position: middledoi
N-acetylneuraminic acid links immune exhaustion and accelerated memory deficit in diet-induced obese Alzheimer’s disease mouse model
Nature Communications 2023cited by 45position: middledoi
Deep brain stimulation of thalamic nucleus reuniens promotes neuronal and cognitive resilience in an Alzheimer’s disease mouse model
Nature Communications 2023cited by 29position: middledoi
A Single-Nucleus Transcriptome-Wide Association Study Implicates Novel Genes in Depression Pathogenesis
Biological Psychiatry 2023cited by 24position: middledoi
Non-invasive assessment of normal and impaired iron homeostasis in the brain
Nature Communications 2023cited by 23position: middledoi
Claustral neurons projecting to frontal cortex restrict opioid consumption
Current Biology 2023cited by 20position: middledoi
Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease
Alzheimer s & Dementia 2023cited by 12position: middledoi
Stroke genetics informs drug discovery and risk prediction across ancestries
Nature 2022cited by 588position: middledoi
High‐throughput morphometric and transcriptomic profiling uncovers composition of naïve and sensory‐deprived cortical cholinergic VIP/CHAT neurons
The EMBO Journal 2022cited by 17position: middledoi
Publisher Correction: Stroke genetics informs drug discovery and risk prediction across ancestries
Nature 2022cited by 12position: middledoi
Stroke genetics informs drug discovery and risk prediction across ancestries
Research Square 2022cited by 10position: middledoi
A cellular and spatial map of the choroid plexus across brain ventricles and ages
Cell 2021cited by 366position: middledoi
Early sample tagging and pooling enables simultaneous SARS-CoV-2 detection and variant sequencing
Science Translational Medicine 2021cited by 11position: middledoi
Single cell biology—a Keystone Symposia report
Annals of the New York Academy of Sciences 2021cited by 4position: middledoi
Disease-associated astrocytes in Alzheimer’s disease and aging
Nature Neuroscience 2020cited by 1,008position: firstdoi
Single cell RNA sequencing of human microglia uncovers a subset associated with Alzheimer’s disease
Nature Communications 2020cited by 750position: middledoi
SARS-CoV-2 detection with ApharSeq v3
2020cited by 2position: middledoi
Nuclei multiplexing with barcoded antibodies for single-nucleus genomics
Nature Communications 2019cited by 211position: middledoi
Massively parallel single-nucleus RNA-seq with DroNc-seq
Nature Methods 2017cited by 1,182position: firstdoi
Div-Seq: Single-nucleus RNA-Seq reveals dynamics of rare adult newborn neurons
Science 2016cited by 674position: firstdoi
Nuclear receptors control pro-viral and antiviral metabolic responses to hepatitis C virus infection
Nature Chemical Biology 2016cited by 53position: middledoi
Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex
Nature 2014cited by 2,925position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Aviv Regev · Moscow Institute of Thermal Technology10 papers (2012–2023)Feng Zhang · Broad Institute6 papers (2013–2023)Daniel Kitsberg · Hebrew University of Jerusalem6 papers (2016–2025)Philip L. De Jager · Mayo Clinic in Florida6 papers (2019–2024)Vilas Menon · Columbia University Irving Medical Center5 papers (2020–2024)Cristin McCabe · Broad Institute5 papers (2019–2024)Gilad S. Green · Hebrew University of Jerusalem5 papers (2021–2024)Miriam Adam · Hebrew University of Jerusalem5 papers (2020–2025)Nir Friedman · Hebrew University of Jerusalem4 papers (2012–2021)Anna K. Schmidtner · Hebrew University of Jerusalem4 papers (2020–2024)Mariko Taga · Columbia University4 papers (2020–2024)Danielle Dionne · Broad Institute4 papers (2019–2021)Orit Rozenblatt–Rosen · Broad Institute4 papers (2017–2023)Feng Zhang · Broad Institute3 papers (2016–2021)Masashi Fujita · Columbia University3 papers (2023–2024)Lan Nguyễn · Broad Institute3 papers (2019–2021)Hyun‐Sik Yang · Rush University Medical Center3 papers (2023–2024)Or Gold · Hebrew University of Jerusalem2 papers (2023–2023)Ronen Sadeh · Hadassah Medical Center2 papers (2020–2021) · 2 papers (2020–2023)