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David Gómez-Cabrero

King's College London · SA
Area of research
Molecular Biology · Pulmonary and Respiratory Medicine
Research interest
Research interests include Epigenetics and DNA Methylation, Single-cell and spatial transcriptomics, Bioinformatics and Genomic Networks, and Chronic Obstructive Pulmonary Disease (COPD) Research.
h-index
44
citations
13,670
works
345
NIH funding
primary concept
Medicine
email

Recent publications

NLRP3-mediated glutaminolysis controls microglial phagocytosis to promote Alzheimer’s disease progression
Immunity 2025cited by 37position: middledoi
Benchmarking cross-species single-cell RNA-seq data integration methods: towards a cell type tree of life
Nucleic Acids Research 2025cited by 21position: middledoi
An atlas of cells in the human tonsil
Immunity 2024cited by 148position: middledoi
A second update on mapping the human genetic architecture of COVID-19
Nature 2023cited by 111position: middledoi
Preclinical models for prediction of immunotherapy outcomes and immune evasion mechanisms in genetically heterogeneous multiple myeloma
Nature Medicine 2023cited by 80position: middledoi
Whispering LLaMA: A Cross-Modal Generative Error Correction Framework for Speech Recognition
2023cited by 30position: middledoi
Alterations in the Oral Microbiome Associated With Diabetes, Overweight, and Dietary Components
Frontiers in Nutrition 2022cited by 43position: middledoi
Epigenetic clock indicates accelerated aging in glial cells of progressive multiple sclerosis patients
Frontiers in Aging Neuroscience 2022cited by 33position: middledoi
Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions
Frontiers in Microbiology 2021cited by 112position: middledoi
A robust machine learning framework to identify signatures for frailty: a nested case-control study in four aging European cohorts
GeroScience 2021cited by 56position: firstdoi
STATegra: Multi-Omics Data Integration – A Conceptual Scheme With a Bioinformatics Pipeline
Frontiers in Genetics 2021cited by 45position: lastdoi
Predicting anti-PD-1 responders in malignant melanoma from the frequency of S100A9+ monocytes in the blood
Journal for ImmunoTherapy of Cancer 2021cited by 24position: middledoi
Single-Cell RNA Sequencing Analysis Reveals a Crucial Role for CTHRC1 (Collagen Triple Helix Repeat Containing 1) Cardiac Fibroblasts After Myocardial Infarction
Circulation 2020cited by 260position: middledoi
Abundance and diversity of resistomes differ between healthy human oral cavities and gut
Nature Communications 2020cited by 112position: middledoi
Harmonization of quality metrics and power calculation in multi-omic studies
Nature Communications 2020cited by 98position: middledoi
Targeted lipidomics reveals extensive changes in circulating lipid mediators in patients with acutely decompensated cirrhosis
Journal of Hepatology 2020cited by 76position: middledoi
GeneSetCluster: a tool for summarizing and integrating gene-set analysis results
BMC Bioinformatics 2020cited by 37position: lastdoi
Multiple sclerosis genomic map implicates peripheral immune cells and microglia in susceptibility
Science 2019cited by 1,404position: middledoi
Therapeutic efficacy of dimethyl fumarate in relapsing-remitting multiple sclerosis associates with ROS pathway in monocytes
Nature Communications 2019cited by 139position: middledoi
Building gene regulatory networks from scATAC-seq and scRNA-seq using Linked Self Organizing Maps
PLoS Computational Biology 2019cited by 100position: middledoi
Combining evidence from four immune cell types identifies DNA methylation patterns that implicate functionally distinct pathways during Multiple Sclerosis progression
EBioMedicine 2019cited by 78position: middledoi
Neuronal methylome reveals CREB-associated neuro-axonal impairment in multiple sclerosis
Clinical Epigenetics 2019cited by 41position: middledoi
Current status of use of big data and artificial intelligence in RMDs: a systematic literature review informing EULAR recommendations
RMD Open 2019cited by 39position: middledoi
DNA methylation as a mediator of HLA-DRB1*15:01 and a protective variant in multiple sclerosis
Nature Communications 2018cited by 209position: middledoi
Time-resolved transcriptome and proteome landscape of human regulatory T cell (Treg) differentiation reveals novel regulators of FOXP3
BMC Biology 2018cited by 65position: middledoi
Network modules uncover mechanisms of skeletal muscle dysfunction in COPD patients
Journal of Translational Medicine 2018cited by 53position: middledoi
Impact of genetic risk loci for multiple sclerosis on expression of proximal genes in patients
Human Molecular Genetics 2018cited by 53position: middledoi
Epigenetic Alterations Associated With Early Prenatal Dexamethasone Treatment
Journal of the Endocrine Society 2018cited by 46position: middledoi
Software for the Integration of Multiomics Experiments in Bioconductor
Cancer Research 2017cited by 112position: middledoi
Functional genomics analysis of vitamin D effects on CD4+ T cells in vivo in experimental autoimmune encephalomyelitis
Proceedings of the National Academy of Sciences 2017cited by 101position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Jesper Tegnér · Karolinska University Hospital19 papers (2012–2025)Maja Jagodic · Karolinska University Hospital11 papers (2013–2022)Ewoud Ewing · Karolinska University Hospital9 papers (2017–2022)Ana Conesa · University of Florida6 papers (2014–2021)Francesco Marabita · Karolinska Institutet5 papers (2012–2018)Fredrik Piehl · Karolinska University Hospital5 papers (2017–2019)Tomas J. Ekström · Karolinska Institutet5 papers (2013–2017)Lara Kular · Karolinska University Hospital5 papers (2017–2022) · 4 papers (2016–2021)Sunjay Jude Fernandes · Karolinska University Hospital4 papers (2017–2019)Malin Almgren · AGA (Sweden)4 papers (2013–2017)Esteban Ballestar · Roswell Park Comprehensive Cancer Center3 papers (2013–2015)Tomas Olsson · Karolinska University Hospital3 papers (2017–2019)Maria Needhamsen · Karolinska University Hospital3 papers (2017–2022)Andrew E. Teschendorff · Shanghai Institute of Nutrition and Health3 papers (2012–2014)Núria Planell · Fundación para el Desarrollo de la Ecología3 papers (2020–2022)Narsis A. Kiani · Karolinska Institutet3 papers (2018–2023)Ingrid Kockum · Karolinska Institutet3 papers (2017–2019)A Mortazavi · California Institute of Technology3 papers (2016–2019)Xuegong Zhang · Ministry of Education of the People's Republic of China2 papers (2016–2016)