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Abhishek Sarkar

Westchester Medical Center ·
Area of research
Molecular Biology · Genetics
Research interest
Research interests include Gene expression and cancer classification, Genetic Associations and Epidemiology, Genomics and Chromatin Dynamics, and Genetic Mapping and Diversity in Plants and Animals.
h-index
17
citations
10,115
works
68
NIH funding
primary concept
email

Recent publications

GoM DE: interpreting structure in sequence count data with differential expression analysis allowing for grades of membership
Genome biology 2023cited by 22position: middledoi
Separating measurement and expression models clarifies confusion in single-cell RNA sequencing analysis
Nature Genetics 2021cited by 275position: firstdoi
Dynamic effects of genetic variation on gene expression revealed following hypoxic stress in cardiomyocytes
eLife 2021cited by 60position: middledoi
A Simple New Approach to Variable Selection in Regression, with Application to Genetic Fine Mapping
Journal of the Royal Statistical Society Series B (Statistical Methodology) 2020cited by 1,123position: middledoi
Gene expression variability in human and chimpanzee populations share common determinants
eLife 2020cited by 51position: middledoi
Discovery and characterization of variance QTLs in human induced pluripotent stem cells
PLoS Genetics 2019cited by 80position: firstdoi
Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk
Nature Genetics 2017cited by 639position: middledoi
Evidence of reduced recombination rate in human regulatory domains
Genome biology 2017cited by 59position: middledoi
Genomic analyses for age at menarche identify 389 independent signals and indicate BMI-independent effects of puberty timing on cancer susceptibility
bioRxiv (Cold Spring Harbor Laboratory) 2016cited by 3position: middledoi
Integrative analysis of 111 reference human epigenomes
Nature 2015cited by 7,075position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Matthew Stephens · Baylor College of Medicine5 papers (2019–2023)Yoav Gilad · University of Chicago3 papers (2019–2021)Peter Carbonetto · University of Chicago2 papers (2020–2023)Nicholas E. Banovich · Michigan Medicine1 papers (2021–2021)Manolis Kellis · Broad Institute1 papers (2017–2017)Yang Li · Zhejiang Sci-Tech University1 papers (2019–2019)Gao Wang · Columbia University Irving Medical Center1 papers (2020–2020)Yaping Liu · Kunming University of Science and Technology1 papers (2017–2017)Karl Tayeb · Igenbio (United States)1 papers (2023–2023)Sebastian Pott · University of Chicago1 papers (2023–2023)Jason Ernst · University of California, Los Angeles1 papers (2017–2017)Pouya Kheradpour · Massachusetts Institute of Technology1 papers (2017–2017)Kaixuan Luo · Kunming Medical University1 papers (2023–2023)Po‐Yuan Tung · Palo Alto Institute1 papers (2019–2019)Jonathan E. Burnett · University of Chicago1 papers (2019–2019)Michelle C. Ward · King Edward Memorial Hospital1 papers (2021–2021)Benjamin Fair · University of Chicago1 papers (2020–2020)John Blischak · University of Chicago1 papers (2019–2019)Claudia Cuevas · Universitat Autònoma de Barcelona1 papers (2020–2020)Lauren E. Blake · Johns Hopkins University1 papers (2020–2020)