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Marina Sirota

University of California, San Francisco · US
Area of research
Immunology · Rheumatology
Research interest
Research interests include Reproductive System and Pregnancy, Systemic Lupus Erythematosus Research, Bioinformatics and Genomic Networks, and Health, Environment, Cognitive Aging.
h-index
51
citations
16,301
works
362
NIH funding
primary concept
email

Recent publications

Cell-type-directed network-correcting combination therapy for Alzheimer’s disease
Cell 2025cited by 29position: lastdoi
AI-guided precision parenteral nutrition for neonatal intensive care units
Nature Medicine 2025cited by 21position: middledoi
Real world perspectives on endometriosis disease phenotyping through surgery, omics, health data, and artificial intelligence
npj Women s Health 2025cited by 14position: middledoi
Exposure to autoimmune disorders is associated with increased Alzheimer’s disease risk in a multi-site electronic health record analysis
Cell Reports Medicine 2025cited by 7position: lastdoi
Discovery of sparse, reliable omic biomarkers with Stabl
Nature Biotechnology 2024cited by 72position: middledoi
Leveraging electronic health records and knowledge networks for Alzheimer’s disease prediction and sex-specific biological insights
Nature Aging 2024cited by 70position: lastdoi
Harnessing EHR data for health research
Nature Medicine 2024cited by 64position: lastdoi
Single-cell RNA-Seq analysis reveals cell subsets and gene signatures associated with rheumatoid arthritis disease activity
JCI Insight 2024cited by 28position: lastdoi
Antidepressant use during pregnancy and the risk of preterm birth – a cohort study
npj Women s Health 2024cited by 14position: lastdoi
Coordinated immune dysregulation in juvenile dermatomyositis revealed by single-cell genomics
JCI Insight 2024cited by 12position: middledoi
Exposure to autoimmune disorders increases Alzheimer’s disease risk in a multi-site electronic health record analysis
medRxiv 2024cited by 3position: lastdoi
Endometriosis in the era of precision medicine and impact on sexual and reproductive health across the lifespan and in diverse populations
The FASEB Journal 2023cited by 82position: lastdoi
Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research
Cell Reports Medicine 2023cited by 37position: lastdoi
Osteosarcoma PDX-Derived Cell Line Models for Preclinical Drug Evaluation Demonstrate Metastasis Inhibition by Dinaciclib through a Genome-Targeted Approach
Clinical Cancer Research 2023cited by 34position: middledoi
Global endometrial DNA methylation analysis reveals insights into mQTL regulation and associated endometriosis disease risk and endometrial function
Communications Biology 2023cited by 32position: middledoi
Deep phenotyping of Alzheimer’s disease leveraging electronic medical records identifies sex-specific clinical associations
Nature Communications 2022cited by 39position: lastdoi
Dense phenotyping from electronic health records enables machine learning-based prediction of preterm birth
BMC Medicine 2022cited by 36position: middledoi
Pulmonary microbiome and gene expression signatures differentiate lung function in pediatric hematopoietic cell transplant candidates
Science Translational Medicine 2022cited by 17position: middledoi
Mortality Risk Among Patients With COVID-19 Prescribed Selective Serotonin Reuptake Inhibitor Antidepressants
JAMA Network Open 2021cited by 139position: middledoi
Experimental and real-world evidence supporting the computational repurposing of bumetanide for APOE4-related Alzheimer’s disease
Nature Aging 2021cited by 109position: middledoi
Crowdsourcing assessment of maternal blood multi-omics for predicting gestational age and preterm birth
Cell Reports Medicine 2021cited by 106position: middledoi
Suspect Screening, Prioritization, and Confirmation of Environmental Chemicals in Maternal-Newborn Pairs from San Francisco
Environmental Science & Technology 2021cited by 88position: middledoi
Tracheal aspirate RNA sequencing identifies distinct immunological features of COVID-19 ARDS
Nature Communications 2021cited by 78position: middledoi
Sex-Specific Association of the X Chromosome With Cognitive Change and Tau Pathology in Aging and Alzheimer Disease
JAMA Neurology 2021cited by 75position: middledoi
A Comprehensive Non-targeted Analysis Study of the Prenatal Exposome
Environmental Science & Technology 2021cited by 68position: middledoi
Single-Cell Mapping of Progressive Fetal-to-Adult Transition in Human Naive T Cells
Cell Reports 2021cited by 59position: middledoi
Transcriptomics-based drug repositioning pipeline identifies therapeutic candidates for COVID-19
Scientific Reports 2021cited by 54position: lastdoi
Sex-Stratified Single-Cell RNA-Seq Analysis Identifies Sex-Specific and Cell Type-Specific Transcriptional Responses in Alzheimer’s Disease Across Two Brain Regions
Molecular Neurobiology 2021cited by 53position: lastdoi
Sex-Specific Cross Tissue Meta-Analysis Identifies Immune Dysregulation in Women With Alzheimer’s Disease
Frontiers in Aging Neuroscience 2021cited by 53position: lastdoi
Transcriptomic analysis of immune cells in a multi-ethnic cohort of systemic lupus erythematosus patients identifies ethnicity- and disease-specific expression signatures
Communications Biology 2021cited by 47position: lastdoi

Grants

No grants ingested yet.

Frequent collaborators

Tomiko Oskotsky · University of California, San Francisco14 papers (2021–2025)Atul J. Butte · UCSF Helen Diller Family Comprehensive Cancer Center11 papers (2012–2024)Alice Tang · QB39 papers (2021–2025)Sarah Woldemariam · University of California, San Francisco7 papers (2022–2025)Dvir Aran · Technion – Israel Institute of Technology6 papers (2015–2019)Nima Aghaeepour · Palo Alto University5 papers (2021–2025)Tracey J. Woodruff · University of California, San Francisco5 papers (2016–2021)Idit Kosti · University of California, San Francisco5 papers (2016–2024)Gabriela K. Fragiadakis · University of California, San Francisco4 papers (2020–2024)Chun Ye · University of California, San Francisco4 papers (2021–2024)Harikrishna Paik · Vel Tech Rangarajan Dr. Sagunthala R&D Institute of Science and Technology4 papers (2015–2017)Aolin Wang · Analysis Group (United States)4 papers (2016–2021)Joanne Nititham · University of California, San Francisco4 papers (2019–2024)Isabel Elaine Allen · University of California, San Francisco4 papers (2022–2025)Daniel Bunis · University of California System4 papers (2020–2021)Boris Oskotsky · University of California, San Francisco4 papers (2017–2022)Gaia Andreoletti · Sage Bionetworks3 papers (2021–2021)Bin Chen · Grand Rapids Community College3 papers (2017–2019)David K. Stevenson · Stanford University3 papers (2019–2025)Caroline Warly Solsberg · National Institutes of Health3 papers (2021–2022)