Area of research
Molecular Biology · Infectious Diseases
Research interest
Research interests include Single-cell and spatial transcriptomics, COVID-19 Clinical Research Studies, Gut microbiota and health, and SARS-CoV-2 and COVID-19 Research.
Host-microbe multiomic profiling identifies distinct COVID-19 immune dysregulation in solid organ transplant recipients
Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study
Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis
Integrated longitudinal multiomics study identifies immune programs associated with acute COVID-19 severity and mortality
Single-cell RNA-Seq analysis reveals cell subsets and gene signatures associated with rheumatoid arthritis disease activity
IgM N-glycosylation correlates with COVID-19 severity and rate of complement deposition
Host-microbe multiomic profiling reveals age-dependent immune dysregulation associated with COVID-19 immunopathology
Distinct pulmonary and systemic effects of dexamethasone in severe COVID-19
Coordinated immune dysregulation in juvenile dermatomyositis revealed by single-cell genomics
Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients
Cyclone: an accessible pipeline to analyze, evaluate, and optimize multiparametric cytometry data
SARS-CoV-2 infection of airway organoids reveals conserved use of Tetraspanin-8 by Ancestral, Delta, and Omicron variants
Integrated longitudinal multi-omics study identifies immune programs associated with COVID-19 severity and mortality in 1152 hospitalized participants
A Comprehensive Atlas of Immunological Differences Between Humans, Mice, and Non-Human Primates
Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: Results from the IMPACC study
Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19
Gut-microbiota-targeted diets modulate human immune status
Global absence and targeting of protective immune states in severe COVID-19
Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19
Discovering dominant tumor immune archetypes in a pan-cancer census
Increased risk of severe clinical course of COVID-19 in carriers of HLA-C*04:01
Tracheal aspirate RNA sequencing identifies distinct immunological features of COVID-19 ARDS
Sex-Stratified Single-Cell RNA-Seq Analysis Identifies Sex-Specific and Cell Type-Specific Transcriptional Responses in Alzheimer’s Disease Across Two Brain Regions
Single-cell transcriptome analysis defines heterogeneity of the murine pancreatic ductal tree
dittoSeq: universal user-friendly single-cell and bulk RNA sequencing visualization toolkit
Gut microbiome transition across a lifestyle gradient in Himalaya
Links between environment, diet, and the hunter-gatherer microbiome
Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states
Multicenter Systems Analysis of Human Blood Reveals Immature Neutrophils in Males and During Pregnancy