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Sten Linnarsson

Karolinska Institutet · SE
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Area of research
Molecular Biology · Developmental Neuroscience
Research interest
Research interests include Single-cell and spatial transcriptomics, Neurogenesis and neuroplasticity mechanisms, Neuroinflammation and Neurodegeneration Mechanisms, and Trace Elements in Health.
h-index
74
citations
44,716
works
231
NIH funding
primary concept
Biology
email

Recent publications

Spatiotemporal gene expression and cellular dynamics of the developing human heart
Nature Genetics 2025cited by 14position: middledoi
The new frontier in understanding human and mammalian brain development
Nature 2025cited by 6position: middledoi
Chromatin accessibility during human first-trimester neurodevelopment
Nature 2024cited by 54position: lastdoi
GABAergic neuronal lineage development determines clinically actionable targets in diffuse hemispheric glioma, H3G34-mutant
Cancer Cell 2024cited by 47position: middledoi
Alternative platelet differentiation pathways initiated by nonhierarchically related hematopoietic stem cells
Nature Immunology 2024cited by 37position: middledoi
The commitment of the human cell atlas to humanity
Nature Communications 2024cited by 18position: middledoi
Applying single-cell and single-nucleus genomics to studies of cellular heterogeneity and cell fate transitions in the nervous system
Nature Neuroscience 2024cited by 15position: middledoi
Transcriptomic diversity of cell types across the adult human brain
Science 2023cited by 724position: lastdoi
Comprehensive cell atlas of the first-trimester developing human brain
Science 2023cited by 251position: lastdoi
Comparative transcriptomics reveals human-specific cortical features
Science 2023cited by 191position: middledoi
Transcriptomic cytoarchitecture reveals principles of human neocortex organization
Science 2023cited by 190position: middledoi
A comparative atlas of single-cell chromatin accessibility in the human brain
Science 2023cited by 152position: middledoi
Single-cell DNA methylation and 3D genome architecture in the human brain
Science 2023cited by 151position: middledoi
A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung
Nature Cell Biology 2023cited by 63position: middledoi
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin
Nature Neuroscience 2023cited by 40position: middledoi
Transcriptional maintenance of cortical somatostatin interneuron subtype identity during migration
Neuron 2023cited by 12position: middledoi
WHOLE BRAIN SINGLE NUCLEUS TRANSCRIPTOMICS IN HUMAN: WHAT WE KNOW SO FAR
IBRO Neuroscience Reports 2023cited by 0position: lastdoi
Single nucleus multi-omics identifies human cortical cell regulatory genome diversity
Cell Genomics 2022cited by 160position: middledoi
Scalable in situ single-cell profiling by electrophoretic capture of mRNA using EEL FISH
Nature Biotechnology 2022cited by 106position: lastdoi
Transcriptomic diversity of cell types across the adult human brain
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 97position: lastdoi
Developmental landscape of human forebrain at a single-cell level identifies early waves of oligodendrogenesis
Developmental Cell 2022cited by 81position: middledoi
Dynamical Systems Model of RNA Velocity Improves Inference of Single-cell Trajectory, Pseudo-time and Gene Regulation
Journal of Molecular Biology 2022cited by 39position: middledoi
Comparative transcriptomics reveals human-specific cortical features
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 24position: middledoi
A comparative atlas of single-cell chromatin accessibility in the human brain
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 17position: middledoi
Transcriptomic cytoarchitecture reveals principles of human neocortex organization
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 15position: middledoi
Epigenomic complexity of the human brain revealed by single-cell DNA methylomes and 3D genome structures
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 10position: middledoi
Scalable <i>in situ</i> single-cell profiling by electrophoretic capture of mRNA
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 8position: lastdoi
Molecular architecture of the developing mouse brain
Nature 2021cited by 582position: lastdoi
A multimodal cell census and atlas of the mammalian primary motor cortex
Nature 2021cited by 564position: middledoi
A roadmap for the Human Developmental Cell Atlas
Nature 2021cited by 189position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Peter Lönnerberg · Karolinska Institutet22 papers (2012–2024)Amit Zeisel · Technion – Israel Institute of Technology15 papers (2013–2018)Gioele La Manno · Karolinska Institutet14 papers (2013–2021)Jens Hjerling‐Leffler · Karolinska Institutet14 papers (2014–2023)Hannah Hochgerner · Technion – Israel Institute of Technology13 papers (2013–2023)Ed S. Lein · Allen Institute for Brain Science12 papers (2017–2023)Ana B. Muñoz‐Manchado · Universidad de Cádiz10 papers (2015–2023)Simone Codeluppi · Karolinska Institutet10 papers (2015–2022)Rebecca D. Hodge · Allen Institute for Brain Science10 papers (2017–2023)Ernest Arenas · Karolinska Institutet9 papers (2016–2023)Lars E. Borm · VIB-KU Leuven Center for Cancer Biology8 papers (2016–2023)Nathan Skene · UK Dementia Research Institute8 papers (2017–2019)Alejandro Mossi Albiach · Karolinska Institutet7 papers (2021–2023)Erik Sundström · Karolinska Institutet6 papers (2018–2025)Emelie Braun · Karolinska Institutet6 papers (2018–2025)Patrik Ernfors · Karolinska Institutet6 papers (2012–2018)Trygve E. Bakken · Allen Institute for Brain Science6 papers (2017–2023) · 6 papers (2016–2023)Julien Bryois · Roche (Switzerland)6 papers (2017–2019)Lijuan Hu · Shanghai University6 papers (2022–2024)
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