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Darren Bertagnolli

Allen Institute for Brain Science · US
Area of research
Molecular Biology · Neurology
Research interest
Research interests include Single-cell and spatial transcriptomics, Neuroinflammation and Neurodegeneration Mechanisms, Neural dynamics and brain function, and Cell Image Analysis Techniques.
h-index
36
citations
20,064
works
65
NIH funding
primary concept
Biology
email

Recent publications

A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types
Cell 2025cited by 45position: middledoi
Enhancer AAV toolbox for accessing and perturbing striatal cell types and circuits
Neuron 2025cited by 37position: middledoi
Continuous cell-type diversification in mouse visual cortex development
Nature 2025cited by 15position: middledoi
Cross-species consensus atlas of the primate basal ganglia
bioRxiv (Cold Spring Harbor Laboratory) 2025cited by 8position: middledoi
Technical and biological sources of noise confound multiplexed enhancer AAV screening
Nature Communications 2025cited by 4position: middledoi
Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species
eLife 2025cited by 1position: middledoi
HCN channels reveal conserved and divergent physiology in supragranular pyramidal neurons in primate species
bioRxiv (Cold Spring Harbor Laboratory) 2025cited by 1position: middledoi
Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species
eLife 2025cited by 0position: middledoi
An integrated, multiregional, and multimodal cell atlas of Alzheimer’s disease
Alzheimer s & Dementia 2025cited by 0position: middledoi
Multimodal Atlas of Caudate Head Reveals Impact of pTau Burden on Resident Glial Cells
Alzheimer s & Dementia 2025cited by 0position: middledoi
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types
bioRxiv (Cold Spring Harbor Laboratory) 2024cited by 22position: middledoi
Enhancer AAV toolbox for accessing and perturbing striatal cell types and circuits
bioRxiv (Cold Spring Harbor Laboratory) 2024cited by 14position: middledoi
Areal specializations in the morpho-electric and transcriptomic properties of primate layer 5 extratelencephalic projection neurons
Cell Reports 2024cited by 10position: middledoi
Continuous cell type diversification throughout the embryonic and postnatal mouse visual cortex development
bioRxiv (Cold Spring Harbor Laboratory) 2024cited by 9position: middledoi
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
Nature 2023cited by 1,000position: middledoi
Comparative transcriptomics reveals human-specific cortical features
Science 2023cited by 191position: middledoi
Transcriptomic cytoarchitecture reveals principles of human neocortex organization
Science 2023cited by 190position: middledoi
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
bioRxiv (Cold Spring Harbor Laboratory) 2023cited by 138position: middledoi
Signature morphoelectric properties of diverse GABAergic interneurons in the human neocortex
Science 2023cited by 118position: middledoi
Morphoelectric and transcriptomic divergence of the layer 1 interneuron repertoire in human versus mouse neocortex
Science 2023cited by 80position: middledoi
Connecting single-cell transcriptomes to projectomes in mouse visual cortex
bioRxiv (Cold Spring Harbor Laboratory) 2023cited by 15position: middledoi
Comparative transcriptomics reveals human-specific cortical features
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 24position: middledoi
Transcriptomic cytoarchitecture reveals principles of human neocortex organization
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 15position: middledoi
Morpho-electric and transcriptomic divergence of the layer 1 interneuron repertoire in human versus mouse neocortex
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 14position: middledoi
Author Correction: Comparative cellular analysis of motor cortex in human, marmoset and mouse
Nature 2022cited by 5position: middledoi
Author Correction: Human neocortical expansion involves glutamatergic neuron diversification
Nature 2022cited by 4position: middledoi
A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation
Cell 2021cited by 1,128position: middledoi
Comparative cellular analysis of motor cortex in human, marmoset and mouse
Nature 2021cited by 820position: middledoi
A multimodal cell census and atlas of the mammalian primary motor cortex
Nature 2021cited by 564position: middledoi
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Nature 2021cited by 372position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Kimberly A. Smith · Allen Institute for Brain Science3 papers (2015–2025)Trygve E. Bakken · Allen Institute for Brain Science2 papers (2015–2025)Jeff Goldy · Allen Institute for Brain Science2 papers (2016–2025)Amy Bernard · Carnegie Mellon University2 papers (2015–2016)Susan M. Sunkin · Allen Institute for Brain Science2 papers (2015–2016)Ed S. Lein · Allen Institute for Brain Science2 papers (2015–2025)Michael Hawrylycz · Allen Institute1 papers (2016–2016)Thuc Nghi Nguyen · Cajal Neuroscience (United States)1 papers (2016–2016)Chang‐Kyu Lee · Seoul National University1 papers (2015–2015)Xiao-Ping Liu · Allen Institute1 papers (2025–2025)Tae Kyung Kim · Allen Institute1 papers (2016–2016)Scott Sawchuk · Allen Institute1 papers (2025–2025)Lucas T. Gray · Allen Institute for Brain Science1 papers (2016–2016)Naz Taskin · Allen Institute for Brain Science1 papers (2025–2025)Brian Kalmbach · Allen Institute for Brain Science1 papers (2025–2025)Hongkui Zeng · Allen Institute for Brain Science1 papers (2016–2016)Bosiljka Tasic · Allen Institute for Brain Science1 papers (2016–2016)Jonathan T. Ting · Allen Institute for Brain Science1 papers (2025–2025)Vilas Menon · Columbia University Irving Medical Center1 papers (2016–2016)Ximena Opitz-Araya · Allen Institute for Brain Science1 papers (2025–2025)