Area of research
Molecular Biology · Ecology
Research interest
Research interests include Genomics and Phylogenetic Studies, Bioinformatics and Genomic Networks, Gut microbiota and health, and Microbial Community Ecology and Physiology.
A global survey of prokaryotic genomes reveals the eco-evolutionary pressures driving horizontal gene transfer
Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest
Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks
Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes
Correction to ‘The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets’
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
Pathway and network analysis of more than 2500 whole cancer genomes
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
Unexplored therapeutic opportunities in the human genome
Erratum: Unexplored therapeutic opportunities in the human genome
Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
Standardized benchmarking in the quest for orthologs
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
STITCH 5: augmenting protein–chemical interaction networks with tissue and affinity data
STRING v10: protein–protein interaction networks, integrated over the tree of life
Pathogens and host immunity in the ancient human oral cavity
Bacterial anoxygenic photosynthesis on plant leaf surfaces