Brian Jiménez‐García

HADDOCK3: A Modular and Versatile Platform for Integrative Modeling of Biomolecular Complexes

Journal of Chemical Information and Modeling 2025cited by 24position: middledoi

The HADDOCK2.4 web server for integrative modeling of biomolecular complexes

Nature Protocols 2024cited by 479position: middledoi

Impact of <scp>AlphaFold</scp> on structure prediction of protein complexes: The <scp>CASP15‐CAPRI</scp> experiment

Proteins Structure Function and Bioinformatics 2023cited by 79position: middledoi

Rational Prediction of PROTAC-Compatible Protein–Protein Interfaces by Molecular Docking

Journal of Chemical Information and Modeling 2023cited by 29position: middledoi

Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study

PROTEOMICS 2023cited by 25position: middledoi

Impact of AlphaFold on Structure Prediction of Protein Complexes: The CASP15-CAPRI Experiment

2023cited by 17position: middledoi

Discriminating physiological from non-physiological interfaces in structures of protein complexes: a community-wide study

2023cited by 6position: middledoi

Towards design of drugs and delivery systems with the Martini coarse-grained model

QRB Discovery 2022cited by 43position: middledoi

Structural Biology in the Clouds: The WeNMR-EOSC Ecosystem

Florence Research (University of Florence) 2021cited by 768position: middledoi

Prediction of protein assemblies, the next frontier: The <scp>CASP14‐CAPRI</scp> experiment

Proteins Structure Function and Bioinformatics 2021cited by 125position: middledoi

Structural Biology in the Clouds: The WeNMR-EOSC Ecosystem

Frontiers in Molecular Biosciences 2021cited by 37position: middledoi

Integrative modeling of membrane-associated protein assemblies

Nature Communications 2020cited by 48position: middledoi

proABC-2: PRediction of AntiBody contacts v2 and its application to information-driven docking

Bioinformatics 2020cited by 48position: middledoi

<scp>PDB‐tools</scp> web: A user‐friendly interface for the manipulation of <scp>PDB</scp> files

Proteins Structure Function and Bioinformatics 2020cited by 32position: firstdoi

Modeling Antibody-Antigen Complexes by Information-Driven Docking

Structure 2019cited by 102position: middledoi

PRODIGY-crystal: a web-tool for classification of biological interfaces in protein complexes

Bioinformatics 2019cited by 52position: firstdoi

LightDock goes information-driven

Bioinformatics 2019cited by 43position: lastdoi

pyDockEneRes: per-residue decomposition of protein–protein docking energy

Bioinformatics 2019cited by 28position: middledoi

SKEMPI 2.0: an updated benchmark of changes in protein–protein binding energy, kinetics and thermodynamics upon mutation

Bioinformatics 2018cited by 382position: middledoi

IRaPPA: information retrieval based integration of biophysical models for protein assembly selection

Bioinformatics 2017cited by 42position: middledoi

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment

Proteins Structure Function and Bioinformatics 2016cited by 164position: middledoi

Updates to the Integrated Protein–Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2

Journal of Molecular Biology 2015cited by 465position: middledoi

Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions

Proteins Structure Function and Bioinformatics 2013cited by 93position: middledoi

Blind prediction of interfacial water positions in CAPRI

Proteins Structure Function and Bioinformatics 2013cited by 57position: middledoi

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