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Mikaël Trellet

Utrecht University · NL
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Area of research
Molecular Biology · Materials Chemistry
Research interest
Research interests include Computer science, Docking (animal), Chemistry, Web server, Interface (matter), and Peptide.
h-index
citations
4,922
works
16
NIH funding
primary concept
email

Recent publications

The HADDOCK2.4 web server for integrative modeling of biomolecular complexes
Nature Protocols 2024cited by 479position: middledoi
Inhibition of the integrated stress response by viral proteins that block p-eIF2–eIF2B association
Nature Microbiology 2020cited by 49position: middledoi
<scp>PDB‐tools</scp> web: A user‐friendly interface for the manipulation of <scp>PDB</scp> files
Proteins Structure Function and Bioinformatics 2020cited by 32position: middledoi
Blind prediction of homo‐ and hetero‐protein complexes: The CASP13‐CAPRI experiment
Proteins Structure Function and Bioinformatics 2019cited by 140position: middledoi
Folding Then Binding vs Folding Through Binding in Macrocyclic Peptide Inhibitors of Human Pancreatic α-Amylase
ACS Chemical Biology 2019cited by 29position: middledoi
Large-scale prediction of binding affinity in protein–small ligand complexes: the PRODIGY-LIG web server
Bioinformatics 2018cited by 254position: middledoi
pdb-tools: a swiss army knife for molecular structures
F1000Research 2018cited by 166position: middledoi
Performance of HADDOCK and a simple contact-based protein–ligand binding affinity predictor in the D3R Grand Challenge 2
Journal of Computer-Aided Molecular Design 2017cited by 139position: middledoi
SpotOn: High Accuracy Identification of Protein-Protein Interface Hot-Spots
Scientific Reports 2017cited by 99position: middledoi
Sense and Simplicity in HADDOCK Scoring: Lessons from CASP‐CAPRI (page 418)
Proteins Structure Function and Bioinformatics 2017cited by 35position: middledoi
The DisVis and PowerFit Web Servers: Explorative and Integrative Modeling of Biomolecular Complexes
Journal of Molecular Biology 2016cited by 63position: middledoi
The HADDOCK2.2 Web Server: User-Friendly Integrative Modeling of Biomolecular Complexes
Journal of Molecular Biology 2015cited by 2,936position: middledoi
A Unified Conformational Selection and Induced Fit Approach to Protein-Peptide Docking
PLoS ONE 2013cited by 202position: firstdoi
Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions
Proteins Structure Function and Bioinformatics 2013cited by 93position: middledoi
Defining the limits of homology modeling in information‐driven protein docking
Proteins Structure Function and Bioinformatics 2013cited by 67position: middledoi
Clustering biomolecular complexes by residue contacts similarity
Proteins Structure Function and Bioinformatics 2012cited by 139position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Alexandre M. J. J. Bonvin · Utrecht University14 papers (2012–2024)João Rodrigues · Utrecht University8 papers (2012–2024)Adrien S. J. Melquiond · Utrecht University7 papers (2012–2024)Ezgi Karaca · Utrecht University5 papers (2012–2024)Gydo C. P. van Zundert · Utrecht University5 papers (2013–2024)Jörg Schaarschmidt · Utrecht University5 papers (2016–2024)Panagiotis L. Kastritis · Utrecht University4 papers (2012–2017)Panagiotis I. Koukos · Utrecht University4 papers (2017–2024)Cunliang Geng · Utrecht University3 papers (2017–2018)Anna Vangone · Utrecht University3 papers (2017–2018)Li C. Xue · Radboud University Nijmegen3 papers (2017–2018)Zeynep Kurkcuoglu · Utrecht University3 papers (2016–2017)Marc van Dijk · Utrecht University3 papers (2013–2017)João M. C. Teixeira · Utrecht University2 papers (2018–2020)Irina S. Moreira · Utrecht University2 papers (2017–2017)Nevia Citro · Utrecht University2 papers (2017–2018)Jorge Roel‐Touris · Utrecht University2 papers (2017–2024)Brian Jiménez‐García · Utrecht University2 papers (2020–2024)Sjoerd J. de Vries · Utrecht University2 papers (2013–2015)Carl Schmitz · Utrecht University2 papers (2013–2015)
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