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David R. Ghasemi

Universität Hamburg · DE
🔎 Find collaborators in Genetics · Molecular Biology →
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Area of research
Genetics · Molecular Biology
Research interest
Research interests include Glioma Diagnosis and Treatment, Ferroptosis and cancer prognosis, Single-cell and spatial transcriptomics, and Cancer Genomics and Diagnostics.
h-index
11
citations
568
works
61
NIH funding
primary concept
email

Recent publications

A brief history of ependymoma
Neuro-Oncology 2026cited by 2position: firstdoi
Multidimensional profiling of heterogeneity in supratentorial ependymomas
Nature 2026cited by 1position: middledoi
Oncogene aberrations drive medulloblastoma progression, not initiation
Nature 2025cited by 15position: middledoi
Comparison of spatial transcriptomics technologies using tumor cryosections
Genome biology 2025cited by 15position: middledoi
Mapping naturally presented T cell antigens in medulloblastoma based on integrative multi-omics
Nature Communications 2025cited by 6position: middledoi
Biglycan-driven risk stratification in ZFTA-RELA fusion supratentorial ependymomas through transcriptome profiling
Acta Neuropathologica Communications 2025cited by 4position: middledoi
Developing an advanced risk stratification model for pediatric intracranial ependymoma based on the prospective trial E-HIT2000 and subsequent registries
Neuro-Oncology 2025cited by 1position: middledoi
Author Correction: Multi-omic and single-cell profiling of chromothriptic medulloblastoma reveals genomic and transcriptomic consequences of genome instability
Nature Communications 2025cited by 1position: middledoi
Developmental basis of SHH medulloblastoma heterogeneity
Nature Communications 2024cited by 27position: middledoi
Comparison of spatial transcriptomics technologies using tumor cryosections
bioRxiv (Cold Spring Harbor Laboratory) 2024cited by 19position: middledoi
Compartments in medulloblastoma with extensive nodularity are connected through differentiation along the granular precursor lineage
Nature Communications 2024cited by 14position: firstdoi
Multi-omic and single-cell profiling of chromothriptic medulloblastoma reveals genomic and transcriptomic consequences of genome instability
Nature Communications 2024cited by 11position: middledoi
EPEN-14. MOLECULAR MARKERS AND PREDICTORS OF OUTCOME FOR PAEDIATRIC INTRACRANIAL EPENDYMOMA IN THE PROSPECTIVE, MULTICENTRE E-HIT2000 TRIAL AND SUBSEQUENT HIT-REGISTRIES: A POOLED ANALYSIS OF 244 PATIENTS
Neuro-Oncology 2024cited by 2position: firstdoi
Author Correction: Compartments in medulloblastoma with extensive nodularity are connected through differentiation along the granular precursor lineage
Nature Communications 2024cited by 1position: firstdoi
STEM-11. MULTIDIMENSIONAL PROFILING OF TUMOR CELL HETEROGENEITY REVEALS CELL-LINEAGE SPECIFIC FUNCTIONS IN SUPRATENTORIAL EPENDYMOMAS
Neuro-Oncology 2024cited by 1position: middledoi
Optimizing biomarkers for accurate ependymoma diagnosis, prognostication, and stratification within International Clinical Trials: A BIOMECA study
Neuro-Oncology 2023cited by 15position: middledoi
EPEN-10. SPINAL EPENDYMOMA WITH MYCN-AMPLIFICATION – A DISEASE OF CHILDHOOD AND YOUNG ADULTHOOD WITH DISMAL PROGNOSIS
Neuro-Oncology 2023cited by 2position: firstdoi
The Current Landscape of Targeted Clinical Trials in Non-WNT/Non-SHH Medulloblastoma
Cancers 2022cited by 9position: firstdoi
Compartments in medulloblastoma with extensive nodularity are connected through differentiation along the granular precursor lineage
bioRxiv (Cold Spring Harbor Laboratory) 2022cited by 6position: firstdoi
Cross-Species Genomics Reveals Oncogenic Dependencies in ZFTA/C11orf95 Fusion–Positive Supratentorial Ependymomas
Cancer Discovery 2021cited by 109position: middledoi
Recurrent fusions in PLAGL1 define a distinct subset of pediatric-type supratentorial neuroepithelial tumors
Acta Neuropathologica 2021cited by 77position: middledoi
Clinically aggressive pediatric spinal ependymoma with novel MYC amplification demonstrates molecular and histopathologic similarity to newly described MYCN-amplified spinal ependymomas
Acta Neuropathologica Communications 2021cited by 24position: middledoi
Single cell multi-omics analysis of chromothriptic medulloblastoma highlights genomic and transcriptomic consequences of genome instability
bioRxiv (Cold Spring Harbor Laboratory) 2021cited by 11position: middledoi
EPEN-03. ZFTA/C11ORF95 FUSIONS DRIVE SUPRATENTORIAL EPENDYMOMA VIA SHARED ONCOGENIC MECHANISMS
Neuro-Oncology 2021cited by 1position: middledoi
Abstract B71: Molecular heterogeneity and novel oncogenic fusions in <i>RELA-</i> and <i>YAP1-</i>negative supratentorial ependymoma
Cancer Research 2020cited by 0position: firstdoi
EPEN-18. CROSS-SPECIES GENOMICS IDENTIFIES <i>GLI2</i> AS AN ONCOGENE OF <i>C11orf95</i> FUSION-POSITIVE SUPRATENTORIAL EPENDYMOMA
Neuro-Oncology 2020cited by 0position: middledoi
MYCN amplification drives an aggressive form of spinal ependymoma
Acta Neuropathologica 2019cited by 177position: firstdoi
Transcriptional profiling of medulloblastoma with extensive nodularity (MBEN) reveals two clinically relevant tumor subsets with VSNL1 as potent prognostic marker
Acta Neuropathologica 2019cited by 17position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Kristian W. Pajtler · German Cancer Research Center11 papers (2020–2025)Stefan M. Pfister · Université du Québec8 papers (2020–2025)Konstantin Okonechnikov · German Cancer Research Center8 papers (2020–2025)Martin Sill · German Cancer Research Center6 papers (2020–2023)Till Milde · Children's Cancer Center5 papers (2020–2025)Andrey Korshunov · German Cancer Research Center5 papers (2020–2022)Kendra K. Maaß · German Cancer Research Center5 papers (2020–2022)David Jones · Mayo Clinic in Florida5 papers (2020–2025)Andreas von Deimling · Stiftung Schleswig-Holsteinische Landesmuseen4 papers (2020–2025)Felix Sahm · Heidelberg (Poland)4 papers (2020–2025)Daisuke Kawauchi · Nagoya City University4 papers (2020–2022)Ulrich Schüller · Universität Hamburg4 papers (2020–2023)Marcel Kool · European Bioinformatics Institute4 papers (2020–2025)Tuyu Zheng · St. Jude Children's Research Hospital4 papers (2020–2025)Rebecca Chapman · University of Nottingham3 papers (2020–2023)Johannes Gojo · University of Hong Kong3 papers (2020–2021)Anne Rademacher · German Cancer Research Center3 papers (2022–2025)Michele Bortolomeazzi · German Cancer Research Center3 papers (2022–2025)Jan‐Philipp Mallm · German Cancer Research Center3 papers (2022–2025)Karsten Rippe · Hopp Children's Cancer Center Heidelberg3 papers (2022–2025)
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