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Nir Hacohen

Broad Institute ·
Area of research
Immunology · Oncology
Research interest
Deficiencies in nucleases that degrade DNA lead to accumulation of self DNA, activation of innate immune responses and development of autoimmune disorders, including systemic lupus erythematosus and Aicardi-Goutières syndrome in humans, and autoimmune arthritis, nephritis and myocarditis in mice. We have been interested in understanding how autoimmunity develops upon triggering of innate immunity by self DNA (rather than pathogen-derived DNA). In studying this question, we made the surprising observation that immunostimulatory DNA can arise from host damaged DNA that is exported from the nucleus to the lysosome (Lan et al., Cell Rep 2014). We hypothesize that this cellular process is a source of inflammation in autoimmunity, cancer, chemotherapy and aging (Lan et al., Aging Cell 2019).
h-index
124
citations
101,559
works
615
NIH funding
primary concept
Medicine
email

Recent publications

A neoantigen vaccine generates antitumour immunity in renal cell carcinoma
Nature 2025cited by 153position: middledoi
Deep immunophenotyping reveals circulating activated lymphocytes in individuals at risk for rheumatoid arthritis
Journal of Clinical Investigation 2025cited by 27position: middledoi
Blood immunophenotyping identifies distinct kidney histopathology and outcomes in patients with lupus nephritis
Journal of Clinical Investigation 2025cited by 10position: middledoi
A human-mouse atlas of intrarenal myeloid cells identifies conserved disease-associated macrophages in lupus nephritis
The Journal of Experimental Medicine 2025cited by 10position: middledoi
Single-cell image-based screens identify host regulators of Ebola virus infection dynamics
Nature Microbiology 2025cited by 9position: middledoi
Overcoming resistance to immunotherapy by targeting CD38 in human tumor explants
Cell Reports Medicine 2025cited by 9position: middledoi
Unveiling alternative splicing dynamics in activated T lymphocytes and their implications for immune checkpoint blockade efficacy
iScience 2025cited by 4position: middledoi
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics
eLife 2025cited by 4position: middledoi
Specific oncogene activation of the cell of origin in mucosal melanoma
Nature Communications 2025cited by 1position: middledoi
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics
eLife 2025cited by 1position: middledoi
Human lung cancer harbors spatially organized stem-immunity hubs associated with response to immunotherapy
Nature Immunology 2024cited by 123position: lastdoi
Single-cell transcriptomic analyses reveal distinct immune cell contributions to epithelial barrier dysfunction in checkpoint inhibitor colitis
Nature Medicine 2024cited by 52position: middledoi
Urine proteomic signatures of histological class, activity, chronicity, and treatment response in lupus nephritis
JCI Insight 2024cited by 51position: middledoi
The chromatin landscape of healthy and injured cell types in the human kidney
Nature Communications 2024cited by 38position: middledoi
Proximity-dependent labeling identifies dendritic cells that drive the tumor-specific CD4 <sup>+</sup> T cell response
Science Immunology 2024cited by 27position: middledoi
The commitment of the human cell atlas to humanity
Nature Communications 2024cited by 18position: middledoi
Cryoablation and post-progression immune checkpoint inhibition in metastatic melanoma: a phase II trial
Nature Communications 2024cited by 11position: middledoi
Automated multi-scale computational pathotyping (AMSCP) of inflamed synovial tissue
Nature Communications 2024cited by 7position: middledoi
An atlas of healthy and injured cell states and niches in the human kidney
Nature 2023cited by 624position: middledoi
<i>CXCL9:SPP1</i> macrophage polarity identifies a network of cellular programs that control human cancers
Science 2023cited by 584position: middledoi
Dictionary of immune responses to cytokines at single-cell resolution
Nature 2023cited by 323position: lastdoi
Human STING is a proton channel
Science 2023cited by 186position: lastdoi
Genomic and transcriptomic analysis of checkpoint blockade response in advanced non-small cell lung cancer
Nature Genetics 2023cited by 181position: middledoi
Combined PD-1, BRAF and MEK inhibition in BRAFV600E colorectal cancer: a phase 2 trial
Nature Medicine 2023cited by 181position: middledoi
High-throughput RNA isoform sequencing using programmed cDNA concatenation
Nature Biotechnology 2023cited by 168position: lastdoi
Targeting TBK1 to overcome resistance to cancer immunotherapy
Nature 2023cited by 165position: middledoi
Exposure of iPSC-derived human microglia to brain substrates enables the generation and manipulation of diverse transcriptional states in vitro
Nature Immunology 2023cited by 148position: middledoi
ESCRT-dependent STING degradation inhibits steady-state and cGAMP-induced signalling
Nature Communications 2023cited by 120position: lastdoi
Low protease activity in B cell follicles promotes retention of intact antigens after immunization
Science 2023cited by 96position: middledoi
Single-cell RNA sequencing of liver fine-needle aspirates captures immune diversity in the blood and liver in chronic hepatitis B patients
Hepatology 2023cited by 47position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Aviv Regev · Moscow Institute of Thermal Technology31 papers (2012–2023)Catherine J. Wu · Dana-Farber/Harvard Cancer Center16 papers (2012–2023)Thomas Eisenhaure · Broad Institute14 papers (2013–2025)Raktima Raychowdhury · Massachusetts Institute of Technology12 papers (2013–2018)Steven A. Carr · Broad Institute12 papers (2012–2023)Alexandra–Chloé Villani · Broad Institute10 papers (2012–2021)Siranush Sarkizova · Moderna Therapeutics (United States)9 papers (2017–2023)Alex K. Shalek · Broad Institute9 papers (2012–2020)Moshe Sade-Feldman · Harvard University8 papers (2019–2025)Genevieve M. Boland · Harvard University8 papers (2019–2025)Nicolas Chevrier · Centre National de la Recherche Scientifique7 papers (2012–2017)Orit Rozenblatt–Rosen · Broad Institute7 papers (2017–2020)Derin B. Keskin · Harvard University7 papers (2014–2023)Nir Yosef · Weizmann Institute of Science7 papers (2012–2017) · 7 papers (2013–2018)Philip L. De Jager · Mayo Clinic in Florida6 papers (2014–2017)Rahul Satija · Genomics (United Kingdom)6 papers (2013–2017)Marko Jovanović · Massachusetts Institute of Technology6 papers (2014–2015)Sachet A. Shukla · The University of Texas MD Anderson Cancer Center6 papers (2014–2018) · 6 papers (2012–2014)