Area of research
Cancer Research · Molecular Biology
Research interest
Research interests include Cancer Genomics and Diagnostics, Single-cell and spatial transcriptomics, Genomics and Phylogenetic Studies, and Genomic variations and chromosomal abnormalities.
Ongoing genome doubling shapes evolvability and immunity in ovarian cancer
CINner: Modeling and simulation of chromosomal instability in cancer at single-cell resolution
Genomics Define Malignant Transformation in Myeloma Precursor Conditions
Cancer Research in the Age of Spatial Omics: Lessons from IMAXT
Single-cell chromatin accessibility reveals malignant regulatory programs in primary human cancers
Single-cell mtDNA dynamics in tumors is driven by coregulation of nuclear and mitochondrial genomes
CINner: modeling and simulation of chromosomal instability in cancer at single-cell resolution
Epigenetic dysregulation from chromosomal transit in micronuclei
Tracking the Evolution of Therapy-Related Myeloid Neoplasms Using Chemotherapy Signatures
Multimodal data integration using machine learning improves risk stratification of high-grade serous ovarian cancer
Ovarian cancer mutational processes drive site-specific immune evasion
Single-cell genomic variation induced by mutational processes in cancer
Clonal somatic copy number altered driver events inform drug sensitivity in high-grade serous ovarian cancer
Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems
Three-dimensional imaging mass cytometry for highly multiplexed molecular and cellular mapping of tissues and the tumor microenvironment
Tim-4+ cavity-resident macrophages impair anti-tumor CD8+ T cell immunity
Landscapes of cellular phenotypic diversity in breast cancer xenografts and their impact on drug response
Imaging mass cytometry and multiplatform genomics define the phenogenomic landscape of breast cancer
Probabilistic cell-type assignment of single-cell RNA-seq for tumor microenvironment profiling
Interfaces of Malignant and Immunologic Clonal Dynamics in Ovarian Cancer
A survey of best practices for RNA-seq data analysis
Divergent modes of clonal spread and intraperitoneal mixing in high-grade serous ovarian cancer
Histological Transformation and Progression in Follicular Lymphoma: A Clonal Evolution Study
Erratum to: A survey of best practices for RNA-seq data analysis
Spatial genomic heterogeneity within localized, multifocal prostate cancer
Dynamics of genomic clones in breast cancer patient xenografts at single-cell resolution
The clonal and mutational evolution spectrum of primary triple-negative breast cancers
14-3-3 fusion oncogenes in high-grade endometrial stromal sarcoma
From sequence to molecular pathology, and a mechanism driving the neuroendocrine phenotype in prostate cancer