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Alla Mikheenko

UK Dementia Research Institute · GB
🔎 Find collaborators in Molecular Biology · Neurology →
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Area of research
Molecular Biology · Neurology
Research interest
Research interests include Genomics and Phylogenetic Studies, Amyotrophic Lateral Sclerosis Research, Chromosomal and Genetic Variations, and RNA Research and Splicing.
h-index
25
citations
9,485
works
70
NIH funding
primary concept
Biology
email

Recent publications

TDP-43 loss induces cryptic polyadenylation in ALS/FTD
Nature Neuroscience 2025cited by 16position: middledoi
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
Nature Methods 2024cited by 195position: middledoi
PolyGR and polyPR knock-in mice reveal a conserved neuroprotective extracellular matrix signature in C9orf72 ALS/FTD neurons
Nature Neuroscience 2024cited by 36position: middledoi
TDP-43 loss induces extensive cryptic polyadenylation in ALS/FTD
bioRxiv (Cold Spring Harbor Laboratory) 2024cited by 25position: middledoi
The complete sequence of a human Y chromosome
Nature 2023cited by 445position: middledoi
Accurate isoform discovery with IsoQuant using long reads
Nature Biotechnology 2023cited by 246position: middledoi
The complete sequence of a human genome
Science 2022cited by 3,266position: middledoi
Complete genomic and epigenetic maps of human centromeres
Science 2022cited by 608position: middledoi
Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue
Nature Biotechnology 2022cited by 128position: middledoi
Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies
Nature Methods 2022cited by 122position: middledoi
The structure, function and evolution of a complete human chromosome 8
Nature 2021cited by 375position: middledoi
TandemTools: mapping long reads and assessing/improving assembly quality in extra-long tandem repeats
Bioinformatics 2020cited by 69position: firstdoi
MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities
Cell Systems 2019cited by 74position: middledoi
Dereplication of microbial metabolites through database search of mass spectra
Nature Communications 2018cited by 352position: middledoi
Increased diversity of peptidic natural products revealed by modification-tolerant database search of mass spectra
Nature Microbiology 2018cited by 102position: middledoi
Dereplication of peptidic natural products through database search of mass spectra
Nature Chemical Biology 2016cited by 257position: middledoi

Grants

No grants ingested yet.

Frequent collaborators

Pavel A. Pevzner · San Diego Supercomputer Center4 papers (2016–2020)Alexey Gurevich · Helmholtz Centre for Infection Research4 papers (2016–2020)Hosein Mohimani · University of California, Los Angeles3 papers (2016–2018)Andrey V. Bzikadze · University of Washington2 papers (2020–2022)Louis‐Félix Nothias · Centre National de la Recherche Scientifique2 papers (2016–2018)Pieter C. Dorrestein · University of Connecticut2 papers (2016–2018)Anton Korobeynikov · Institut Pasteur2 papers (2018–2018) · 2 papers (2018–2018)Karen H. Miga · University of California, Santa Cruz2 papers (2020–2022)Matthew J. Keuss · University of Dundee1 papers (2024–2024)Hagen Tilgner · Cornell University1 papers (2023–2023)Daniela C. Soto · Neurobehavioral Systems1 papers (2022–2022)Michael Alonge · APT Therapeutics (United States)1 papers (2022–2022) · 1 papers (2023–2023)Arang Rhie · National Human Genome Research Institute1 papers (2022–2022)Kishwar Shafin · Google (United States)1 papers (2022–2022)Oscar G. Wilkins · UK Dementia Research Institute1 papers (2024–2024)Francesca Mattedi · Queen Mary University of London1 papers (2024–2024)Adam M. Phillippy · National Human Genome Research Institute1 papers (2022–2022) · 1 papers (2024–2024)
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