Area of research
Molecular Biology · Spectroscopy
Research interest
Research interests include Genomics and Phylogenetic Studies, Metabolomics and Mass Spectrometry Studies, Advanced Proteomics Techniques and Applications, and Bioinformatics and Genomic Networks.
Scikit-bio: a fundamental Python library for biological omic data analysis
SolidBin: improving metagenome binning with semi-supervised normalized cut
Alignment-Free Sequence Analysis and Applications
VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data
CAFE: aCcelerated Alignment-FrEe sequence analysis
Improving contig binning of metagenomic data using $$ {d}_2^S $$ oligonucleotide frequency dissimilarity
Alignment-free $d_2^*$ oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences
COCACOLA: binning metagenomic contigs using sequence COmposition, read CoverAge, CO-alignment and paired-end read LinkAge